Chaitanya K. Joshi
Chaitanya K. Joshi
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RNA
gRNAde: Geometric Deep Learning for 3D RNA Inverse Design
gRNAde
is a geometric deep learning pipeline for 3D RNA inverse design, analogous to ProteinMPNN. gRNAde outperforms physically-based Rosetta and is significantly faster.
(Invited book chapter for
Methods in Molecular Biology
)
Chaitanya K. Joshi
,
Arian R. Jamasb
,
Ramon Viñas
,
Charles Harris
,
Simon Mathis
,
Pietro Liò
PDF
Cite
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Slides
Video
Tutorial
Multi-State RNA Design with Geometric Multi-Graph Neural Networks
We propose
gRNAde
, a geometric deep learning pipeline for 3D RNA inverse design from one or more backbone structures.
(Invited book chapter for
Methods in Molecular Biology
)
Chaitanya K. Joshi
,
Arian R. Jamasb
,
Ramon Viñas
,
Charles Harris
,
Simon Mathis
,
Pietro Liò
PDF
Cite
Code
Slides
Video
Cite
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